Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879756.1_cds_XP_016437275.1_33052
CDS Infomation

[gene=LOC107763312] [db_xref=GeneID:107763312] [protein=U-box domain-containing protein 11-like] [protein_id=XP_016437275.1] [location=complement(join(12318..13388,13539..13991,14071..14187,14928..15224))] [gbkey=CDS]
Sequence

ATGGCCGGCGGAGAATCCACCGCCGTCGCGACTAAGATCCCACTCCAGCTAGTTCACGAC
GTCAGTCGAATTTCCAGTGCCGGATTTTCTGGTTTGTTCAAGAAAGACTGTACTGATTTG
GGCAGAAGATTGTCTCCTTTGGCTCATTTGCTTGAGGAAATCAGGGATTCAAACAACATC
CTTTTGGTTTCTTCATCTTCTTCCCACAATTCTTGCCTTTATGATCTCTCTTTAGCTCTC
AAGGCTTCAAAAAGATTGCTTTTAGCTGCTAATGACTTTGATCCCAAGATCTCATCTGAC
GCGGCAAGGAAGAAGATCGTTTTTCAATTTCAATGTGTGATATGGAAATTGGAGAAATCC
CTGGGCAGCTTACCATATGACCAGCTCGATATATCAGAAGAAGTGCAAGAGCAGGTTGAA
TTGATCAGAACACAATTGAAACGAGCCAAAGAGAGGTATGGTGGACCTGTGACTTCAAAT
TTGTTATCTCGAGCATTGTCCCAACCATTAGATAAGGAGATTGATCCGCTTCACTCGGCT
AGTACGGGAGTTGGAAGTTTACATGTAGAGAATATTGGCATTATTGATCACGAAGTTAGG
CCAAAACTTGGAGGTGTTCCTTTGGGCAGTGGTCCAAATGGCAATGATTGCAGTCAGATA
GTTCAGGAACCAGAAAATCTAAGGAATTCAACCAAATTGTCTGAGGTTGCTTTCCCAAAT
ATTCCCGGTTCGGCCAGCGAAGATGACTCACCCAGAAAGAATCTCGTGGAGAGTAAGAAG
ACAAATTCTCCTATAATTCCTGAAGAGTATCTCTGCCCTATATCCCTTGAACTCATGAGG
GATCCTGTAATTGTGGCCACAGGACAGACTTATGAGAGATCTTTCATACAAAGATGGATA
GACGGAGGCAACACAAGATGCCCAAAAACTCAGCAGATGCTCCAAGATCTTACGCTGACA
CCAAATATTGCTTTGCGAAGTCTCATTTCTGATTGGTGTGCAAAGAACAATATGGAGCAA
CCAACTGCATTAGCATATGCGAGAATAAAGAGAAGTGATGGATCATTTCGTGATGTTAGT
GGGGATATAGCAGCTATTGATGCAATTGTACGCAAGCTTTCAAGCAGGTCCACCGAGGAT
CGGAGGGCTGCAGTAGCGGAGATACGGTCGCTATCCAAAAGAAGCACAGATAACAGAATT
TTGCTTGCTGAAGCTGGTGCAATCCCCATGTTGGTTAACTTGTTGACATCTGAAGACAGT
CAAATTCAAGATAATGCCGTCACTTCTATTCTTAACCTCTCTATATTTGATAGCAACAAG
GGGATTATAATGCTTGCCGGTGCTGTTCCTTCTATCGTTCAAGTTCTCAGAGCTGGAAGC
ATGGAAGCAAAAGAGAATGCAGCAGCAACCATCTTTAGTTTGTCACTTGGAGATGAGAAT
AAAATAATAATAGGTGCATCGGGAGCCATACCAGCTCTGGTCGAATTGCTTCGGACTGGA
AGCACTAGAGGGAAGAAAGATGCTGCAACAGCATTGTTTAACTTATGCATATATCAAGGA
AACAAGGGTAGGGCGGTACGGGCAGGGATTATACCAGCATTGTTAACGATGCTGACAGAT
TCAAGCAATTGCATGGTTGATGAAGCTTTGACCATTCTTTCCGTTCTTGCCAGCCACCAA
GAAGCCAAGGCTGCCATAGCAAAAGTGAGCACAATCCCTGTGTTGATAGATCTACTAAGG
ACAGGTCTACCTCGTAATAAAGAGAATGCAGCTGCTATCTTACTCTCCTTGTGCAAGAGA
GATCCTGAGAATTTATCTTGCCTTCGTAGGCTCGGTGCACTTATACCTCTTTCGGAGCTT
GCTAATAGTGGCACCGAGAGGGCAAAGAGGAAGGCTACTTCATTGTTGGAGCACCTTAGA
AAATCTCAGCAGCCTTGA

Peptide Sequence

PEP ID

XP_016437275.1
PEP Infomation

PREDICTED: U-box domain-containing protein 11-like [Nicotiana tabacum]
Sequence

MAGGESTAVATKIPLQLVHDVSRISSAGFSGLFKKDCTDLGRRLSPLAHLLEEIRDSNNI
LLVSSSSSHNSCLYDLSLALKASKRLLLAANDFDPKISSDAARKKIVFQFQCVIWKLEKS
LGSLPYDQLDISEEVQEQVELIRTQLKRAKERYGGPVTSNLLSRALSQPLDKEIDPLHSA
STGVGSLHVENIGIIDHEVRPKLGGVPLGSGPNGNDCSQIVQEPENLRNSTKLSEVAFPN
IPGSASEDDSPRKNLVESKKTNSPIIPEEYLCPISLELMRDPVIVATGQTYERSFIQRWI
DGGNTRCPKTQQMLQDLTLTPNIALRSLISDWCAKNNMEQPTALAYARIKRSDGSFRDVS
GDIAAIDAIVRKLSSRSTEDRRAAVAEIRSLSKRSTDNRILLAEAGAIPMLVNLLTSEDS
QIQDNAVTSILNLSIFDSNKGIIMLAGAVPSIVQVLRAGSMEAKENAAATIFSLSLGDEN
KIIIGASGAIPALVELLRTGSTRGKKDAATALFNLCIYQGNKGRAVRAGIIPALLTMLTD
SSNCMVDEALTILSVLASHQEAKAAIAKVSTIPVLIDLLRTGLPRNKENAAAILLSLCKR
DPENLSCLRRLGALIPLSELANSGTERAKRKATSLLEHLRKSQQP

Transcript Sequence

Gene sequence data has not been registered.